Release Notes Screenshots Download
New Features:
Data support.
- Maximum Likelihood Estimation (MLE)
- Modify existing data set and create new data set.
Jobs Added:
Feature Details:
Data support
Jobs can select data from a drop-down combo box. Only relevant data sets are shown. The application is preloaded with data sets.
Maximum Likelihood Estimation (MLE)
For Infinite-Alleles Model.
- For Infinite-Sites Model
Data Set
Modify existing data set and create new data set.
When a job is run, the URL of the data set is given in the output window
Use Favorites to add the folder/file. Edit the data set and run jobs using the
drop-down data combo box.
Create a copy of the data set in the Favorites window; restart application to
see the data in the drop-down data combo box.
Release Notes
Coalescent 1.4.0:
Bug
- [COALESCENT-24] - IllegalStateException in ExactRecursionListener
- [COALESCENT-29] - Genealogy Probability work-around Fixed
Design
- [COALESCENT-28] - Statistic.alleles() from Set to Iterable
Feature
- [COALESCENT-12] - Data support
- [COALESCENT-14] - Statistic: Allele based Iteration
- [COALESCENT-19] - Acceptance Test
- [COALESCENT-22] - Console application
- [COALESCENT-31] - MLE (Exact) of theta for K69
- [COALESCENT-40] - MLE (Exact) of theta for KC64
Refactor
- [COALESCENT-20] - Builder and Provider-Impls Updated
- [COALESCENT-27] - BigDecimal in Statistic
Task
- [COALESCENT-41] - GeneTree Test Updated
Commons 1.2.2:
Feature
- [COMMONS-61] - Likelihood with Estimators
- [COMMONS-62] - Compute Model Likelihood
- [COMMONS-63] - Model Estimation
- [COMMONS-67] - Key-Value Combo Builder Property
Task
- [COMMONS-53] - Model & Data Simulation Interface
- [COMMONS-64] - A StringList2 Provider: WHITE-SPACE
- [COMMONS-65] - A StringList Provider: WHITE-SPACE