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Release Notes  Demo/Screenshots  Download  Road Map

Publication: An open-source and scalable framework for exact calculations in coalescent theory  BMC Bioinformatics (2012) 13:257

New Features:

  1. Data support.

  2. Maximum Likelihood Estimation (MLE)
  3. Modify existing data set and create new data set.

Jobs Added:

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Maximum Likelihood Estimation (MLE)

For Infinite-Alleles Model.

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Data support

Jobs can select data from a drop-down combo box. Only relevant data sets are shown. The application is preloaded with data sets.

Maximum Likelihood Estimation (MLE)

  1. For Infinite-Alleles Model.

  2. For Infinite-Sites Model

Data Set

Data Life Cycle

  1. When a job is run, the URL of the data set is given in the output 
    window.
  2. Use Favorites to add the folder/file. Edit the data set and run 
    jobs using the 

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  1. drop-down data combo box.
  2. Create a copy of the data set in the Favorites window; restart 
    application to 

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  1. see the data in the drop-down data combo box.

Release Notes

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Coalescent 1.4.0:

Bug

Design

Feature

Refactor

Task

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Commons 1.2.2:

Feature

Task

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For Infinite-Sites Model

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